Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 AC112191.1-201ENST00000523689 701 ntBASIC17.22■□□□□ 0.35
SIPA1Q96FS4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 AC004835.2-201ENST00000603762 682 ntBASIC17.22■□□□□ 0.35
SIPA1Q96FS4 REXO1L3P-201ENST00000622202 1288 ntBASIC17.22■□□□□ 0.35
SIPA1Q96FS4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 AC006116.8-202ENST00000587620 1550 ntBASIC17.22■□□□□ 0.35
SIPA1Q96FS4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.21■□□□□ 0.35
SIPA1Q96FS4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 AL513210.1-201ENST00000629608 234 ntBASIC17.21■□□□□ 0.35
SIPA1Q96FS4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 LYSMD4-203ENST00000378904 2122 ntBASIC17.21■□□□□ 0.35
SIPA1Q96FS4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIPA1Q96FS4 AC092919.2-201ENST00000623631 1645 ntBASIC17.21■□□□□ 0.35
SIPA1Q96FS4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SIPA1Q96FS4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 TSEN15P1-201ENST00000423257 515 ntBASIC17.2■□□□□ 0.34
SIPA1Q96FS4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 AC105339.1-204ENST00000636249 355 ntBASIC17.2■□□□□ 0.34
SIPA1Q96FS4 OR6D1P-202ENST00000641007 5290 ntBASIC17.2■□□□□ 0.34
SIPA1Q96FS4 AC005332.8-201ENST00000622750 2735 ntBASIC17.2■□□□□ 0.34
SIPA1Q96FS4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIPA1Q96FS4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIPA1Q96FS4 AC012317.2-201ENST00000623305 2251 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms