Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 FLJ38576-201ENST00000623820 2459 ntBASIC19.43■□□□□ 0.7
SMARCE1Q969G3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMARCE1Q969G3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 PCDHA14-201ENST00000506751 2298 ntBASIC19.41■□□□□ 0.7
SMARCE1Q969G3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 TMPOP1-202ENST00000424642 1267 ntBASIC19.41■□□□□ 0.7
SMARCE1Q969G3 AC246785.2-201ENST00000432512 513 ntBASIC19.41■□□□□ 0.7
SMARCE1Q969G3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms