Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 AC005104.2-201ENST00000427818 678 ntBASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 KRT18P48-201ENST00000434763 852 ntBASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 KRT18P56-201ENST00000507275 550 ntBASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 KRT8P26-201ENST00000534154 1276 ntBASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 ATP5G2P1-201ENST00000433580 426 ntBASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 HCG4P8-203ENST00000443049 980 ntBASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AP003733.1-201ENST00000491725 852 ntBASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 AC024563.2-201ENST00000603282 481 ntBASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 BX276092.7-203ENST00000637198 1536 ntBASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40AQ8WXH6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AL391005.1-201ENST00000623953 2435 ntBASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 PCDHA1-201ENST00000378133 2726 ntBASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms