Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
ZSWIM2Q8NEG5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ZSWIM2Q8NEG5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZSWIM2Q8NEG5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZSWIM2Q8NEG5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 GPR89P-201ENST00000407924 1495 ntBASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 AC006557.2-201ENST00000592985 1240 ntBASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.71■□□□□ 0.59
ZSWIM2Q8NEG5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 IGHV3-22-201ENST00000520721 359 ntBASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 SLC25A1P1-201ENST00000528351 927 ntBASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZSWIM2Q8NEG5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 AC090340.1-201ENST00000620778 4980 ntBASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 RPS15P9-201ENST00000494093 319 ntBASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 AC136632.2-201ENST00000512891 861 ntBASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ZSWIM2Q8NEG5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 DUX4L17-201ENST00000557360 1267 ntBASIC18.68■□□□□ 0.58
ZSWIM2Q8NEG5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms