Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 MIR4259-201ENST00000584466 101 ntBASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 AL096828.2-201ENST00000567259 1965 ntBASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 TMEM14DP-201ENST00000422205 345 ntBASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 AP005482.1-201ENST00000563722 1273 ntBASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 FZD10-202ENST00000539839 3282 ntBASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC168Q8NDH2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 MIR6869-201ENST00000619434 62 ntBASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AL109936.8-201ENST00000641772 604 ntBASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AP3S2-216ENST00000617003 1561 ntBASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AC007967.4-201ENST00000614700 386 ntBASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC168Q8NDH2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 AC093004.1-201ENST00000508850 424 ntBASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms