Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AC025580.3-201ENST00000617932 1424 ntBASIC17.48■□□□□ 0.39
PGBD3Q8N328 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 FAM58CP-201ENST00000435741 640 ntBASIC17.48■□□□□ 0.39
PGBD3Q8N328 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 KRT19P2-202ENST00000557173 1012 ntBASIC17.48■□□□□ 0.39
PGBD3Q8N328 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 AL353135.1-201ENST00000606729 504 ntBASIC17.48■□□□□ 0.39
PGBD3Q8N328 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD3Q8N328 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD3Q8N328 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AL645939.2-201ENST00000427340 991 ntBASIC17.47■□□□□ 0.39
PGBD3Q8N328 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC074386.1-202ENST00000463561 864 ntBASIC17.47■□□□□ 0.39
PGBD3Q8N328 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC023141.13-201ENST00000604991 943 ntBASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC106028.4-201ENST00000614509 607 ntBASIC17.47■□□□□ 0.39
PGBD3Q8N328 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PGBD3Q8N328 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PGBD3Q8N328 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.46■□□□□ 0.39
PGBD3Q8N328 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.46■□□□□ 0.39
PGBD3Q8N328 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PGBD3Q8N328 CYMP-203ENST00000474680 1263 ntBASIC17.46■□□□□ 0.39
PGBD3Q8N328 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 AC002558.1-201ENST00000488906 803 ntBASIC17.46■□□□□ 0.39
PGBD3Q8N328 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.46■□□□□ 0.39
PGBD3Q8N328 RFPL4AP1-201ENST00000530883 850 ntBASIC17.46■□□□□ 0.39
PGBD3Q8N328 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.46■□□□□ 0.39
PGBD3Q8N328 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PGBD3Q8N328 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PGBD3Q8N328 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms