Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.27■■□□□ 1
SYNE4Q8N205 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SYNE4Q8N205 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNE4Q8N205 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNE4Q8N205 AC018470.1-201ENST00000624790 3129 ntBASIC21.27■□□□□ 0.99
SYNE4Q8N205 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 TFAMP1-201ENST00000412727 736 ntBASIC21.26■□□□□ 0.99
SYNE4Q8N205 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 AC190387.1-201ENST00000551683 408 ntBASIC21.26■□□□□ 0.99
SYNE4Q8N205 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 AJ011932.1-201ENST00000621707 465 ntBASIC21.26■□□□□ 0.99
SYNE4Q8N205 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNE4Q8N205 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNE4Q8N205 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 SLC22A20-204ENST00000530038 1673 ntBASIC21.25■□□□□ 0.99
SYNE4Q8N205 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 RNA5SP421-201ENST00000516864 134 ntBASIC21.25■□□□□ 0.99
SYNE4Q8N205 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 AC009093.7-201ENST00000623853 1223 ntBASIC21.25■□□□□ 0.99
SYNE4Q8N205 Z92544.3-201ENST00000624747 417 ntBASIC21.25■□□□□ 0.99
SYNE4Q8N205 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 AC134043.2-201ENST00000624206 2238 ntBASIC21.25■□□□□ 0.99
SYNE4Q8N205 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
SYNE4Q8N205 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNE4Q8N205 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.24■□□□□ 0.99
SYNE4Q8N205 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.24■□□□□ 0.99
SYNE4Q8N205 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.24■□□□□ 0.99
SYNE4Q8N205 AC005237.2-201ENST00000434368 219 ntBASIC21.24■□□□□ 0.99
SYNE4Q8N205 AL592309.1-201ENST00000443127 649 ntBASIC21.24■□□□□ 0.99
SYNE4Q8N205 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.24■□□□□ 0.99
SYNE4Q8N205 SPDYE11-202ENST00000450699 704 ntBASIC21.24■□□□□ 0.99
SYNE4Q8N205 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 AC069335.1-201ENST00000489972 472 ntBASIC21.24■□□□□ 0.99
SYNE4Q8N205 AC093214.1-201ENST00000511688 1107 ntBASIC21.24■□□□□ 0.99
SYNE4Q8N205 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNE4Q8N205 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms