Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 AC092171.3-201ENST00000610122 2651 ntBASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD1LQ86WJ1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 LINC00982-205ENST00000420957 435 ntBASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 FOSL1P1-201ENST00000511041 816 ntBASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD1LQ86WJ1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 UPK3BP1-201ENST00000428678 509 ntBASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 DUX4L17-201ENST00000557360 1267 ntBASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD1LQ86WJ1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms