Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.4■□□□□ 0.7
SHC4Q6S5L8 AP001269.4-201ENST00000609611 512 ntBASIC19.4■□□□□ 0.7
SHC4Q6S5L8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC4Q6S5L8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SHC4Q6S5L8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.39■□□□□ 0.7
SHC4Q6S5L8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHC4Q6S5L8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.39■□□□□ 0.7
SHC4Q6S5L8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHC4Q6S5L8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.39■□□□□ 0.7
SHC4Q6S5L8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 AL603756.1-201ENST00000606511 2163 ntBASIC19.39■□□□□ 0.69
SHC4Q6S5L8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 ARMC10P1-201ENST00000313754 855 ntBASIC19.39■□□□□ 0.69
SHC4Q6S5L8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 LINC00982-205ENST00000420957 435 ntBASIC19.39■□□□□ 0.69
SHC4Q6S5L8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 AC138894.3-201ENST00000603787 634 ntBASIC19.39■□□□□ 0.69
SHC4Q6S5L8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC4Q6S5L8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AP005117.1-201ENST00000584346 1413 ntBASIC19.38■□□□□ 0.69
SHC4Q6S5L8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AL591684.3-201ENST00000605187 298 ntBASIC19.38■□□□□ 0.69
SHC4Q6S5L8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms