Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.39□□□□□ -0.27
KCNIP4Q6PIL6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 AC092171.3-201ENST00000610122 2651 ntBASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 AC142086.2-201ENST00000569753 217 ntBASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 AC083880.1-201ENST00000608266 535 ntBASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 RNF216P1-203ENST00000404404 2427 ntBASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP4Q6PIL6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 MIR564-202ENST00000385049 94 ntBASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 UNC93B4-201ENST00000505679 747 ntBASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms