Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AC116353.5-201ENST00000638148 1699 ntBASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 EGFEM1P-202ENST00000431685 1563 ntBASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 AC129492.6-201ENST00000611383 1305 ntBASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 AC023141.13-201ENST00000604991 943 ntBASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 ACTL9-202ENST00000612068 1252 ntBASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 AC007064.4-201ENST00000637740 555 ntBASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SWSAP1Q6NVH7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 PP12613-201ENST00000424958 2230 ntBASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 PDPK2P-202ENST00000562415 1191 ntBASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SWSAP1Q6NVH7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.08■□□□□ 0.65
SWSAP1Q6NVH7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 AL513480.1-201ENST00000451731 511 ntBASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SWSAP1Q6NVH7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms