Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 DNAJB3-201ENST00000446806 729 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 AC108073.2-201ENST00000464002 357 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 RPS15P9-201ENST00000494093 319 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 AC002347.1-201ENST00000569543 541 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 AC008667.4-201ENST00000607370 168 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 AC009336.1-201ENST00000608941 1553 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.56■□□□□ 0.08
RTL6Q6ICC9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RTL6Q6ICC9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 IGHV3-65-201ENST00000523210 341 ntBASIC15.55■□□□□ 0.08
RTL6Q6ICC9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTL6Q6ICC9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 AC002558.1-201ENST00000488906 803 ntBASIC15.54■□□□□ 0.08
RTL6Q6ICC9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MIR3687-2-201ENST00000577708 61 ntBASIC15.54■□□□□ 0.08
RTL6Q6ICC9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MIR3687-1-201ENST00000614492 61 ntBASIC15.54■□□□□ 0.08
RTL6Q6ICC9 AC004790.2-201ENST00000623588 572 ntBASIC15.54■□□□□ 0.08
RTL6Q6ICC9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms