Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 AC023274.1-201ENST00000418278 595 ntBASIC20.05■□□□□ 0.8
CCDC96Q2M329 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 GGTLC5P-201ENST00000617623 998 ntBASIC20.05■□□□□ 0.8
CCDC96Q2M329 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC96Q2M329 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC96Q2M329 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 KRT18P2-201ENST00000447938 1258 ntBASIC20.04■□□□□ 0.8
CCDC96Q2M329 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 AC018845.2-201ENST00000568326 409 ntBASIC20.04■□□□□ 0.8
CCDC96Q2M329 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 AC010654.1-201ENST00000615722 808 ntBASIC20.04■□□□□ 0.8
CCDC96Q2M329 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC96Q2M329 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC96Q2M329 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 PRSS29P-201ENST00000440800 595 ntBASIC20.03■□□□□ 0.8
CCDC96Q2M329 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 AC040169.1-201ENST00000565382 521 ntBASIC20.03■□□□□ 0.8
CCDC96Q2M329 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC96Q2M329 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC96Q2M329 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC96Q2M329 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 HCG4B-203ENST00000450128 991 ntBASIC20.02■□□□□ 0.8
CCDC96Q2M329 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 GPALPP1-207ENST00000611650 899 ntBASIC20.02■□□□□ 0.8
CCDC96Q2M329 AC006538.3-201ENST00000612495 578 ntBASIC20.02■□□□□ 0.8
CCDC96Q2M329 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC96Q2M329 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms