Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HIST1H3AP68431 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.05■□□□□ -0
HIST1H3AP68431 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.05■□□□□ -0
HIST1H3AP68431 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 AC097637.2-201ENST00000624096 1997 ntBASIC15.05■□□□□ -0
HIST1H3AP68431 AC105020.1-201ENST00000435356 2205 ntBASIC15.05■□□□□ -0
HIST1H3AP68431 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
HIST1H3AP68431 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.05■□□□□ -0
HIST1H3AP68431 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
HIST1H3AP68431 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HIST1H3AP68431 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
HIST1H3AP68431 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.04■□□□□ -0
HIST1H3AP68431 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.04■□□□□ -0
HIST1H3AP68431 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.04■□□□□ -0
HIST1H3AP68431 AL732292.2-201ENST00000609649 430 ntBASIC15.04■□□□□ -0
HIST1H3AP68431 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 AL139288.1-201ENST00000623748 933 ntBASIC15.04■□□□□ -0
HIST1H3AP68431 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.04■□□□□ -0
HIST1H3AP68431 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST1H3AP68431 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.04■□□□□ -0
HIST1H3AP68431 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
HIST1H3AP68431 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
HIST1H3AP68431 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.03■□□□□ -0
HIST1H3AP68431 NKILA-202ENST00000614771 2598 ntBASIC15.03■□□□□ -0
HIST1H3AP68431 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.03■□□□□ -0
HIST1H3AP68431 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.03■□□□□ -0
HIST1H3AP68431 AL353135.1-201ENST00000606729 504 ntBASIC15.03■□□□□ -0
HIST1H3AP68431 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.03■□□□□ -0
HIST1H3AP68431 AL355877.3-201ENST00000622820 899 ntBASIC15.03■□□□□ -0
HIST1H3AP68431 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.03■□□□□ -0
HIST1H3AP68431 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HIST1H3AP68431 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
HIST1H3AP68431 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H3AP68431 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HIST1H3AP68431 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms