Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.14□□□□□ -0.47
CKS1BP61024 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.14□□□□□ -0.47
CKS1BP61024 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.14□□□□□ -0.47
CKS1BP61024 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CKS1BP61024 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CKS1BP61024 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CKS1BP61024 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS1BP61024 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 GPAT2P1-201ENST00000444924 1672 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 TNRC18P2-201ENST00000417666 2714 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 AL163051.1-201ENST00000569214 1512 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 AC007950.2-201ENST00000615045 2347 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 HLA-L-209ENST00000420110 1011 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 AC090192.1-201ENST00000517740 490 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.13□□□□□ -0.47
CKS1BP61024 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.13□□□□□ -0.47
CKS1BP61024 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 AC092666.2-201ENST00000613287 246 ntBASIC12.13□□□□□ -0.47
CKS1BP61024 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CKS1BP61024 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CKS1BP61024 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
CKS1BP61024 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS1BP61024 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 AC099343.3-201ENST00000605834 2503 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 FAM45BP-202ENST00000592932 1624 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms