Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.08□□□□□ -0.16
SPCS3P61009 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.07□□□□□ -0.16
SPCS3P61009 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.07□□□□□ -0.16
SPCS3P61009 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.07□□□□□ -0.16
SPCS3P61009 MIR4497-201ENST00000583208 89 ntBASIC14.07□□□□□ -0.16
SPCS3P61009 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
SPCS3P61009 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPCS3P61009 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 KRT18P22-201ENST00000402024 1347 ntBASIC14.07□□□□□ -0.16
SPCS3P61009 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 AC099063.4-201ENST00000641099 1602 ntBASIC14.07□□□□□ -0.16
SPCS3P61009 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SPCS3P61009 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 LINC01568-207ENST00000641790 1380 ntBASIC14.07□□□□□ -0.16
SPCS3P61009 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS3P61009 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS3P61009 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SPCS3P61009 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 TSPY26P-202ENST00000565928 3884 ntBASIC14.06□□□□□ -0.16
SPCS3P61009 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 FAM8A6P-201ENST00000407496 1135 ntBASIC14.06□□□□□ -0.16
SPCS3P61009 AC096633.1-201ENST00000422446 749 ntBASIC14.06□□□□□ -0.16
SPCS3P61009 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SPCS3P61009 AC079602.3-201ENST00000623931 403 ntBASIC14.06□□□□□ -0.16
SPCS3P61009 AL031432.5-201ENST00000641059 760 ntBASIC14.06□□□□□ -0.16
SPCS3P61009 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SPCS3P61009 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.06□□□□□ -0.16
SPCS3P61009 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms