Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CDC42P60953 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 AC096633.1-201ENST00000422446 749 ntBASIC15.78■□□□□ 0.12
CDC42P60953 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.78■□□□□ 0.12
CDC42P60953 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CDC42P60953 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDC42P60953 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC42P60953 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC42P60953 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 MIR718-201ENST00000390190 70 ntBASIC15.77■□□□□ 0.12
CDC42P60953 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 KRT18P48-201ENST00000434763 852 ntBASIC15.77■□□□□ 0.12
CDC42P60953 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.77■□□□□ 0.12
CDC42P60953 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC42P60953 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC42P60953 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC42P60953 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC42P60953 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC42P60953 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC42P60953 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC42P60953 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CDC42P60953 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC42P60953 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC42P60953 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.77■□□□□ 0.11
CDC42P60953 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.76■□□□□ 0.11
CDC42P60953 AC022188.1-201ENST00000620960 1664 ntBASIC15.76■□□□□ 0.11
CDC42P60953 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC42P60953 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC42P60953 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDC42P60953 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC42P60953 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 INGX-201ENST00000359239 846 ntBASIC15.76■□□□□ 0.11
CDC42P60953 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CDC42P60953 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC42P60953 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms