Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 PTCHD3P3-201ENST00000403073 906 ntBASIC15.79■□□□□ 0.12
RFC3P40938 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFC3P40938 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC3P40938 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC3P40938 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.79■□□□□ 0.12
RFC3P40938 AC018845.2-201ENST00000568326 409 ntBASIC15.79■□□□□ 0.12
RFC3P40938 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RFC3P40938 AC004790.2-201ENST00000623588 572 ntBASIC15.79■□□□□ 0.12
RFC3P40938 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC3P40938 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFC3P40938 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC3P40938 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RFC3P40938 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC3P40938 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
RFC3P40938 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RFC3P40938 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
RFC3P40938 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC3P40938 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC3P40938 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC3P40938 AC040169.1-201ENST00000565382 521 ntBASIC15.78■□□□□ 0.12
RFC3P40938 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.78■□□□□ 0.12
RFC3P40938 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC3P40938 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC3P40938 AC046185.3-201ENST00000623228 1824 ntBASIC15.78■□□□□ 0.12
RFC3P40938 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
RFC3P40938 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC3P40938 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 AL391005.1-201ENST00000623953 2435 ntBASIC15.77■□□□□ 0.12
RFC3P40938 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC3P40938 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.77■□□□□ 0.12
RFC3P40938 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.77■□□□□ 0.12
RFC3P40938 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC3P40938 AC046158.3-201ENST00000624947 2558 ntBASIC15.77■□□□□ 0.12
RFC3P40938 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 YBX2P1-201ENST00000394192 760 ntBASIC15.77■□□□□ 0.12
RFC3P40938 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC3P40938 CRYGEP-201ENST00000412192 528 ntBASIC15.77■□□□□ 0.12
RFC3P40938 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RFC3P40938 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.77■□□□□ 0.12
RFC3P40938 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.77■□□□□ 0.12
RFC3P40938 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC3P40938 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC3P40938 AC055717.3-201ENST00000622967 595 ntBASIC15.77■□□□□ 0.12
RFC3P40938 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RFC3P40938 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC3P40938 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC3P40938 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.77■□□□□ 0.11
RFC3P40938 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC3P40938 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC3P40938 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.77■□□□□ 0.11
RFC3P40938 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.77■□□□□ 0.11
RFC3P40938 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC3P40938 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RFC3P40938 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms