Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 AC034232.1-201ENST00000506026 1064 ntBASIC14.22□□□□□ -0.13
SNCAP37840 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SNCAP37840 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.22□□□□□ -0.13
SNCAP37840 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.22□□□□□ -0.13
SNCAP37840 TMEM191A-211ENST00000637163 1067 ntBASIC14.22□□□□□ -0.13
SNCAP37840 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 LINC00304-203ENST00000565008 1864 ntBASIC14.22□□□□□ -0.13
SNCAP37840 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.22□□□□□ -0.13
SNCAP37840 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNCAP37840 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SNCAP37840 AL136379.1-201ENST00000623471 2642 ntBASIC14.21□□□□□ -0.13
SNCAP37840 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SNCAP37840 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.21□□□□□ -0.13
SNCAP37840 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.21□□□□□ -0.13
SNCAP37840 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.21□□□□□ -0.13
SNCAP37840 AC092068.3-201ENST00000587894 2016 ntBASIC14.21□□□□□ -0.13
SNCAP37840 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 INGX-201ENST00000359239 846 ntBASIC14.21□□□□□ -0.13
SNCAP37840 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.21□□□□□ -0.13
SNCAP37840 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SNCAP37840 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.21□□□□□ -0.13
SNCAP37840 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.21□□□□□ -0.13
SNCAP37840 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.21□□□□□ -0.13
SNCAP37840 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.21□□□□□ -0.13
SNCAP37840 HLA-J-201ENST00000462773 1622 ntBASIC14.21□□□□□ -0.13
SNCAP37840 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNCAP37840 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNCAP37840 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.21□□□□□ -0.14
SNCAP37840 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms