Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.45■■□□□ 1.02
RFC4P35249 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC4P35249 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
RFC4P35249 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.44■■□□□ 1.02
RFC4P35249 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
RFC4P35249 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
RFC4P35249 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
RFC4P35249 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.44■■□□□ 1.02
RFC4P35249 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.44■■□□□ 1.02
RFC4P35249 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RFC4P35249 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.44■■□□□ 1.02
RFC4P35249 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.44■■□□□ 1.02
RFC4P35249 AL359881.2-201ENST00000602973 570 ntBASIC21.44■■□□□ 1.02
RFC4P35249 AL590560.3-201ENST00000623350 461 ntBASIC21.44■■□□□ 1.02
RFC4P35249 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
RFC4P35249 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 AC100757.3-201ENST00000622361 1406 ntBASIC21.44■■□□□ 1.02
RFC4P35249 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFC4P35249 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RFC4P35249 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RFC4P35249 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.43■■□□□ 1.02
RFC4P35249 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 RNU1-129P-201ENST00000384064 167 ntBASIC21.43■■□□□ 1.02
RFC4P35249 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.43■■□□□ 1.02
RFC4P35249 RN7SL692P-201ENST00000464677 288 ntBASIC21.43■■□□□ 1.02
RFC4P35249 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.43■■□□□ 1.02
RFC4P35249 U1.21-201ENST00000580816 167 ntBASIC21.43■■□□□ 1.02
RFC4P35249 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.43■■□□□ 1.02
RFC4P35249 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.43■■□□□ 1.02
RFC4P35249 AL031055.1-201ENST00000606362 631 ntBASIC21.43■■□□□ 1.02
RFC4P35249 AC073592.8-201ENST00000624126 511 ntBASIC21.43■■□□□ 1.02
RFC4P35249 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.43■■□□□ 1.02
RFC4P35249 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.43■■□□□ 1.02
RFC4P35249 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RFC4P35249 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.43■■□□□ 1.02
RFC4P35249 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFC4P35249 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.43■■□□□ 1.02
RFC4P35249 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RFC4P35249 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC4P35249 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RFC4P35249 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.42■■□□□ 1.02
RFC4P35249 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.42■■□□□ 1.02
RFC4P35249 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.42■■□□□ 1.02
RFC4P35249 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.42■■□□□ 1.02
RFC4P35249 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.42■■□□□ 1.02
RFC4P35249 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.42■■□□□ 1.02
RFC4P35249 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.42■■□□□ 1.02
RFC4P35249 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC4P35249 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC4P35249 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC4P35249 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC4P35249 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RFC4P35249 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.41■■□□□ 1.02
RFC4P35249 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RFC4P35249 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.41■■□□□ 1.02
RFC4P35249 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
RFC4P35249 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RFC4P35249 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFC4P35249 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms