Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL1P22362 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL1P22362 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL1P22362 NPAP1P7-201ENST00000613027 823 ntBASIC14.81□□□□□ -0.04
CCL1P22362 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CCL1P22362 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.81□□□□□ -0.04
CCL1P22362 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 AC004817.3-201ENST00000602957 2129 ntBASIC14.81□□□□□ -0.04
CCL1P22362 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CCL1P22362 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
CCL1P22362 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 ABCD1P5-201ENST00000445663 754 ntBASIC14.8□□□□□ -0.04
CCL1P22362 FAM210CP-201ENST00000445714 574 ntBASIC14.8□□□□□ -0.04
CCL1P22362 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.8□□□□□ -0.04
CCL1P22362 AC104819.1-201ENST00000504587 486 ntBASIC14.8□□□□□ -0.04
CCL1P22362 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.8□□□□□ -0.04
CCL1P22362 AC087388.1-201ENST00000571370 1112 ntBASIC14.8□□□□□ -0.04
CCL1P22362 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 AP000550.4-202ENST00000639755 178 ntBASIC14.8□□□□□ -0.04
CCL1P22362 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCL1P22362 AC079776.2-201ENST00000641154 1609 ntBASIC14.8□□□□□ -0.04
CCL1P22362 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 AL645728.1-201ENST00000366221 2101 ntBASIC14.8□□□□□ -0.04
CCL1P22362 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL1P22362 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CCL1P22362 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 HLA-A-202ENST00000376806 1854 ntBASIC14.79□□□□□ -0.04
CCL1P22362 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms