Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CAPN3P20807 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CAPN3P20807 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN3P20807 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN3P20807 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN3P20807 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CAPN3P20807 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN3P20807 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPN3P20807 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPN3P20807 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.61■□□□□ 0.25
CAPN3P20807 AC092329.2-201ENST00000598402 547 ntBASIC16.61■□□□□ 0.25
CAPN3P20807 AC019129.2-201ENST00000609837 1235 ntBASIC16.61■□□□□ 0.25
CAPN3P20807 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPN3P20807 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN3P20807 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CAPN3P20807 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN3P20807 LINC02199-201ENST00000506655 2702 ntBASIC16.61■□□□□ 0.25
CAPN3P20807 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPN3P20807 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
CAPN3P20807 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.6■□□□□ 0.25
CAPN3P20807 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.6■□□□□ 0.25
CAPN3P20807 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CAPN3P20807 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.6■□□□□ 0.25
CAPN3P20807 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN3P20807 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CAPN3P20807 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN3P20807 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CAPN3P20807 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 AL845331.1-201ENST00000424978 1190 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 AC124947.2-201ENST00000547118 1133 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.59■□□□□ 0.25
CAPN3P20807 GPR32P1-201ENST00000601788 811 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 NPAP1P7-201ENST00000613027 823 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 AC083849.1-201ENST00000615227 514 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 AC097374.2-201ENST00000618617 1306 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 AC008741.2-201ENST00000612792 3115 ntBASIC16.59■□□□□ 0.25
CAPN3P20807 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN3P20807 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CAPN3P20807 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN3P20807 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN3P20807 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms