Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.1■□□□□ 0.49
RARAP10276 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.1■□□□□ 0.49
RARAP10276 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.1■□□□□ 0.49
RARAP10276 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.1■□□□□ 0.49
RARAP10276 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.1■□□□□ 0.49
RARAP10276 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 RNF216P1-203ENST00000404404 2427 ntBASIC18.1■□□□□ 0.49
RARAP10276 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RARAP10276 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RARAP10276 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RARAP10276 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RARAP10276 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RARAP10276 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 PMPCAP1-201ENST00000508114 1576 ntBASIC18.09■□□□□ 0.49
RARAP10276 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RARAP10276 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 AC003669.1-201ENST00000334569 611 ntBASIC18.09■□□□□ 0.49
RARAP10276 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.09■□□□□ 0.49
RARAP10276 UPK3BP1-201ENST00000428678 509 ntBASIC18.09■□□□□ 0.49
RARAP10276 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.09■□□□□ 0.49
RARAP10276 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RARAP10276 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.09■□□□□ 0.49
RARAP10276 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.09■□□□□ 0.49
RARAP10276 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RARAP10276 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.09■□□□□ 0.49
RARAP10276 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.09■□□□□ 0.49
RARAP10276 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RARAP10276 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
RARAP10276 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RARAP10276 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.08■□□□□ 0.49
RARAP10276 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.08■□□□□ 0.49
RARAP10276 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RARAP10276 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RARAP10276 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RARAP10276 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RARAP10276 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
RARAP10276 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.08■□□□□ 0.48
RARAP10276 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RARAP10276 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.08■□□□□ 0.48
RARAP10276 KLF4P1-201ENST00000412782 1185 ntBASIC18.08■□□□□ 0.48
RARAP10276 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RARAP10276 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.08■□□□□ 0.48
RARAP10276 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.08■□□□□ 0.48
RARAP10276 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.08■□□□□ 0.48
RARAP10276 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.08■□□□□ 0.48
RARAP10276 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 MIR5100-201ENST00000579544 119 ntBASIC18.08■□□□□ 0.48
RARAP10276 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.08■□□□□ 0.48
RARAP10276 AP000867.4-201ENST00000641616 219 ntBASIC18.08■□□□□ 0.48
RARAP10276 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RARAP10276 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RARAP10276 AL135999.2-201ENST00000622438 1686 ntBASIC18.08■□□□□ 0.48
RARAP10276 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RARAP10276 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RARAP10276 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.08■□□□□ 0.48
RARAP10276 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RARAP10276 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
RARAP10276 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms