Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AP002414.3-201ENST00000589352 1468 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 AL020989.1-201ENST00000422979 469 ntBASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 AC073592.4-201ENST00000623827 446 ntBASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNYL3P0C7X3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 AC006116.8-202ENST00000587620 1550 ntBASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 SPDYE21P-201ENST00000413323 827 ntBASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 MIR3687-2-201ENST00000577708 61 ntBASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 MIR3687-1-201ENST00000614492 61 ntBASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNYL3P0C7X3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCNYL3P0C7X3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
CCNYL3P0C7X3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 PCDHA12-202ENST00000613593 2588 ntBASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNYL3P0C7X3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms