Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 NKILA-202ENST00000614771 2598 ntBASIC18.66■□□□□ 0.58
CCDC172P0C7W6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 AL049597.2-201ENST00000565575 961 ntBASIC18.66■□□□□ 0.58
CCDC172P0C7W6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC172P0C7W6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.65■□□□□ 0.58
CCDC172P0C7W6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 STK19B-204ENST00000512515 211 ntBASIC18.65■□□□□ 0.58
CCDC172P0C7W6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 NTF6B-201ENST00000591913 560 ntBASIC18.65■□□□□ 0.58
CCDC172P0C7W6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 NFIC-211ENST00000641145 8399 ntBASIC18.65■□□□□ 0.58
CCDC172P0C7W6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC172P0C7W6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC172P0C7W6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC172P0C7W6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC172P0C7W6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC172P0C7W6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCDC172P0C7W6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.64■□□□□ 0.58
CCDC172P0C7W6 FLJ38576-201ENST00000623820 2459 ntBASIC18.64■□□□□ 0.58
CCDC172P0C7W6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 AC003669.1-201ENST00000334569 611 ntBASIC18.64■□□□□ 0.57
CCDC172P0C7W6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 AC124947.2-201ENST00000547118 1133 ntBASIC18.64■□□□□ 0.57
CCDC172P0C7W6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 AC011467.2-201ENST00000598425 242 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms