Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.84■□□□□ 0.45
CD48P09326 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.84■□□□□ 0.45
CD48P09326 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CD48P09326 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.83■□□□□ 0.45
CD48P09326 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD48P09326 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.83■□□□□ 0.45
CD48P09326 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CD48P09326 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD48P09326 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.83■□□□□ 0.45
CD48P09326 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CD48P09326 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD48P09326 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD48P09326 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CD48P09326 AC078925.2-201ENST00000624013 1973 ntBASIC17.83■□□□□ 0.44
CD48P09326 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.83■□□□□ 0.44
CD48P09326 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.83■□□□□ 0.44
CD48P09326 ACTG1P4-201ENST00000425123 1122 ntBASIC17.83■□□□□ 0.44
CD48P09326 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.83■□□□□ 0.44
CD48P09326 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.83■□□□□ 0.44
CD48P09326 PRELID1P1-202ENST00000567272 903 ntBASIC17.83■□□□□ 0.44
CD48P09326 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.83■□□□□ 0.44
CD48P09326 NKAPP1-205ENST00000585790 367 ntBASIC17.83■□□□□ 0.44
CD48P09326 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.83■□□□□ 0.44
CD48P09326 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CD48P09326 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.83■□□□□ 0.44
CD48P09326 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.83■□□□□ 0.44
CD48P09326 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD48P09326 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
CD48P09326 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CD48P09326 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 AC092171.3-201ENST00000610122 2651 ntBASIC17.82■□□□□ 0.44
CD48P09326 UBALD1-205ENST00000590891 2641 ntBASIC17.82■□□□□ 0.44
CD48P09326 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 AKR1C7P-201ENST00000305623 895 ntBASIC17.82■□□□□ 0.44
CD48P09326 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.82■□□□□ 0.44
CD48P09326 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.82■□□□□ 0.44
CD48P09326 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.82■□□□□ 0.44
CD48P09326 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.82■□□□□ 0.44
CD48P09326 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.82■□□□□ 0.44
CD48P09326 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.82■□□□□ 0.44
CD48P09326 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CD48P09326 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.82■□□□□ 0.44
CD48P09326 MTDHP3-201ENST00000594186 672 ntBASIC17.82■□□□□ 0.44
CD48P09326 CLEC4GP1-201ENST00000596555 870 ntBASIC17.82■□□□□ 0.44
CD48P09326 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.82■□□□□ 0.44
CD48P09326 AC064862.7-201ENST00000604520 867 ntBASIC17.82■□□□□ 0.44
CD48P09326 AL121772.3-201ENST00000610840 674 ntBASIC17.82■□□□□ 0.44
CD48P09326 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CD48P09326 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD48P09326 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CD48P09326 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
CD48P09326 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CD48P09326 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD48P09326 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD48P09326 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.81■□□□□ 0.44
CD48P09326 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.81■□□□□ 0.44
CD48P09326 AC091304.2-201ENST00000564639 760 ntBASIC17.81■□□□□ 0.44
CD48P09326 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.81■□□□□ 0.44
CD48P09326 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.81■□□□□ 0.44
CD48P09326 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
CD48P09326 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD48P09326 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms