Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
P04436 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P04436 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.72■□□□□ 0.11
P04436 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P04436 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
P04436 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 AC092865.5-201ENST00000545435 363 ntBASIC15.72■□□□□ 0.11
P04436 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P04436 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
P04436 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.72■□□□□ 0.11
P04436 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.72■□□□□ 0.11
P04436 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.72■□□□□ 0.11
P04436 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P04436 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.72■□□□□ 0.11
P04436 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
P04436 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
P04436 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 AL138688.1-201ENST00000624851 1594 ntBASIC15.71■□□□□ 0.11
P04436 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
P04436 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
P04436 KRT18P13-201ENST00000400056 1290 ntBASIC15.71■□□□□ 0.11
P04436 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.71■□□□□ 0.11
P04436 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.71■□□□□ 0.11
P04436 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.71■□□□□ 0.11
P04436 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.71■□□□□ 0.11
P04436 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.71■□□□□ 0.11
P04436 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.71■□□□□ 0.11
P04436 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04436 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.71■□□□□ 0.11
P04436 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.71■□□□□ 0.11
P04436 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
P04436 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04436 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
P04436 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04436 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
P04436 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.71■□□□□ 0.1
P04436 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
P04436 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
P04436 BX842568.4-201ENST00000421222 227 ntBASIC15.7■□□□□ 0.1
P04436 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.7■□□□□ 0.1
P04436 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.7■□□□□ 0.1
P04436 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
P04436 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.7■□□□□ 0.1
P04436 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.7■□□□□ 0.1
P04436 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04436 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
P04436 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
P04436 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.69■□□□□ 0.1
P04436 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
P04436 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms