Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.64□□□□□ -0.07
CD3DP04234 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CD3DP04234 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.64□□□□□ -0.07
CD3DP04234 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.64□□□□□ -0.07
CD3DP04234 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CD3DP04234 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.64□□□□□ -0.07
CD3DP04234 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.64□□□□□ -0.07
CD3DP04234 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.64□□□□□ -0.07
CD3DP04234 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD3DP04234 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.64□□□□□ -0.07
CD3DP04234 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 MST1L-201ENST00000442552 2185 ntBASIC14.63□□□□□ -0.07
CD3DP04234 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 AL365203.3-201ENST00000609742 2057 ntBASIC14.63□□□□□ -0.07
CD3DP04234 ABHD17AP1-201ENST00000358206 933 ntBASIC14.63□□□□□ -0.07
CD3DP04234 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.63□□□□□ -0.07
CD3DP04234 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 AC024563.2-201ENST00000603282 481 ntBASIC14.63□□□□□ -0.07
CD3DP04234 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.63□□□□□ -0.07
CD3DP04234 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.63□□□□□ -0.07
CD3DP04234 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 AC113410.3-201ENST00000623366 203 ntBASIC14.63□□□□□ -0.07
CD3DP04234 AC010653.2-201ENST00000623505 997 ntBASIC14.63□□□□□ -0.07
CD3DP04234 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CD3DP04234 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD3DP04234 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 HLA-A-202ENST00000376806 1854 ntBASIC14.63□□□□□ -0.07
CD3DP04234 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD3DP04234 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.63□□□□□ -0.07
CD3DP04234 KRT89P-201ENST00000620027 1478 ntBASIC14.63□□□□□ -0.07
CD3DP04234 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms