Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TOMM40O96008 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 AC060834.1-201ENST00000443027 2032 ntBASIC13.53□□□□□ -0.24
TOMM40O96008 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 AC211429.1-201ENST00000415277 523 ntBASIC13.53□□□□□ -0.24
TOMM40O96008 AL671277.2-201ENST00000458060 996 ntBASIC13.53□□□□□ -0.24
TOMM40O96008 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.53□□□□□ -0.24
TOMM40O96008 AC122714.2-201ENST00000502787 707 ntBASIC13.53□□□□□ -0.24
TOMM40O96008 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.53□□□□□ -0.24
TOMM40O96008 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 AC111152.3-201ENST00000569699 673 ntBASIC13.53□□□□□ -0.24
TOMM40O96008 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.53□□□□□ -0.24
TOMM40O96008 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.53□□□□□ -0.24
TOMM40O96008 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TOMM40O96008 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.53□□□□□ -0.24
TOMM40O96008 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.53□□□□□ -0.24
TOMM40O96008 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TOMM40O96008 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TOMM40O96008 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TOMM40O96008 AGGF1P2-201ENST00000426656 2106 ntBASIC13.52□□□□□ -0.24
TOMM40O96008 AC105020.1-201ENST00000435356 2205 ntBASIC13.52□□□□□ -0.24
TOMM40O96008 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TOMM40O96008 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
TOMM40O96008 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TOMM40O96008 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TOMM40O96008 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.52□□□□□ -0.24
TOMM40O96008 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TOMM40O96008 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TOMM40O96008 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 TSPY22P-201ENST00000427496 604 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 AC103564.2-201ENST00000432853 1299 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 RN7SL606P-201ENST00000472779 293 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.52□□□□□ -0.25
TOMM40O96008 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
TOMM40O96008 AC022616.7-201ENST00000525383 220 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TOMM40O96008 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.52□□□□□ -0.25
TOMM40O96008 AC090616.6-201ENST00000582640 721 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.52□□□□□ -0.25
TOMM40O96008 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.52□□□□□ -0.25
TOMM40O96008 AL592071.1-201ENST00000611956 408 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.52□□□□□ -0.25
TOMM40O96008 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.52□□□□□ -0.25
TOMM40O96008 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.52□□□□□ -0.25
TOMM40O96008 AC125634.1-201ENST00000438758 1403 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TOMM40O96008 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TOMM40O96008 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TOMM40O96008 AC046185.3-201ENST00000623228 1824 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TOMM40O96008 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 PCDHB19P-201ENST00000570871 2371 ntBASIC13.52□□□□□ -0.25
TOMM40O96008 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TOMM40O96008 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TOMM40O96008 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TOMM40O96008 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms