Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.53■■□□□ 1.2
LTN1O94822 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.53■■□□□ 1.2
LTN1O94822 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.53■■□□□ 1.2
LTN1O94822 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 IGHV3-62-201ENST00000520057 340 ntBASIC22.53■■□□□ 1.2
LTN1O94822 AC005225.4-201ENST00000557330 545 ntBASIC22.53■■□□□ 1.2
LTN1O94822 MIR4492-201ENST00000581627 80 ntBASIC22.53■■□□□ 1.2
LTN1O94822 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.53■■□□□ 1.2
LTN1O94822 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.53■■□□□ 1.2
LTN1O94822 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.52■■□□□ 1.2
LTN1O94822 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LTN1O94822 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.52■■□□□ 1.2
LTN1O94822 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC22.52■■□□□ 1.2
LTN1O94822 BASP1P1-201ENST00000430708 665 ntBASIC22.52■■□□□ 1.2
LTN1O94822 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC22.52■■□□□ 1.2
LTN1O94822 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.52■■□□□ 1.2
LTN1O94822 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.52■■□□□ 1.2
LTN1O94822 BANF1P1-201ENST00000553684 263 ntBASIC22.52■■□□□ 1.2
LTN1O94822 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC22.52■■□□□ 1.2
LTN1O94822 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.52■■□□□ 1.2
LTN1O94822 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.52■■□□□ 1.2
LTN1O94822 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LTN1O94822 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LTN1O94822 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
LTN1O94822 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
LTN1O94822 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
LTN1O94822 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
LTN1O94822 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.51■■□□□ 1.19
LTN1O94822 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.51■■□□□ 1.19
LTN1O94822 MIR4453-201ENST00000584019 89 ntBASIC22.51■■□□□ 1.19
LTN1O94822 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.51■■□□□ 1.19
LTN1O94822 AF228730.6-201ENST00000641497 218 ntBASIC22.51■■□□□ 1.19
LTN1O94822 AC084121.3-201ENST00000641716 218 ntBASIC22.51■■□□□ 1.19
LTN1O94822 AC105233.6-201ENST00000642093 218 ntBASIC22.51■■□□□ 1.19
LTN1O94822 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.51■■□□□ 1.19
LTN1O94822 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
LTN1O94822 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
LTN1O94822 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 TOP3BP1-201ENST00000420768 1380 ntBASIC22.51■■□□□ 1.19
LTN1O94822 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.51■■□□□ 1.19
LTN1O94822 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LTN1O94822 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.5■■□□□ 1.19
LTN1O94822 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.5■■□□□ 1.19
LTN1O94822 PRYP6-201ENST00000514804 343 ntBASIC22.5■■□□□ 1.19
LTN1O94822 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.5■■□□□ 1.19
LTN1O94822 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.5■■□□□ 1.19
LTN1O94822 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.5■■□□□ 1.19
LTN1O94822 KRT8P49-201ENST00000604166 1432 ntBASIC22.5■■□□□ 1.19
LTN1O94822 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.5■■□□□ 1.19
LTN1O94822 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.5■■□□□ 1.19
LTN1O94822 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.5■■□□□ 1.19
LTN1O94822 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.5■■□□□ 1.19
LTN1O94822 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.5■■□□□ 1.19
LTN1O94822 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LTN1O94822 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
LTN1O94822 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms