Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 AC093677.2-201ENST00000600169 1863 ntBASIC17.07■□□□□ 0.32
PCDHGA12O60330 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.07■□□□□ 0.32
PCDHGA12O60330 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 AP002414.1-201ENST00000391405 1147 ntBASIC17.07■□□□□ 0.32
PCDHGA12O60330 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 STK25P1-201ENST00000585406 838 ntBASIC17.07■□□□□ 0.32
PCDHGA12O60330 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 AC004877.2-201ENST00000623941 599 ntBASIC17.07■□□□□ 0.32
PCDHGA12O60330 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 PKD1P1-201ENST00000458669 6805 ntBASIC17.07■□□□□ 0.32
PCDHGA12O60330 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA12O60330 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA12O60330 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 AC138028.4-201ENST00000564984 1845 ntBASIC17.06■□□□□ 0.32
PCDHGA12O60330 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 SLC25A6P5-201ENST00000435663 894 ntBASIC17.06■□□□□ 0.32
PCDHGA12O60330 RHOQP3-201ENST00000437982 621 ntBASIC17.06■□□□□ 0.32
PCDHGA12O60330 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 AC116407.2-201ENST00000613639 860 ntBASIC17.06■□□□□ 0.32
PCDHGA12O60330 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 AC010507.1-201ENST00000633895 436 ntBASIC17.06■□□□□ 0.32
PCDHGA12O60330 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA12O60330 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA12O60330 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms