Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC7O00311 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC7O00311 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDC7O00311 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC7O00311 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC7O00311 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 NUS1P1-201ENST00000446295 882 ntBASIC16.91■□□□□ 0.3
CDC7O00311 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDC7O00311 SIGLEC30P-201ENST00000455569 941 ntBASIC16.91■□□□□ 0.3
CDC7O00311 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC7O00311 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CDC7O00311 FOSL1P1-201ENST00000511041 816 ntBASIC16.91■□□□□ 0.3
CDC7O00311 AC124947.2-201ENST00000547118 1133 ntBASIC16.91■□□□□ 0.3
CDC7O00311 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDC7O00311 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC7O00311 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDC7O00311 RNF216P1-203ENST00000404404 2427 ntBASIC16.91■□□□□ 0.3
CDC7O00311 AC004817.3-201ENST00000602957 2129 ntBASIC16.91■□□□□ 0.3
CDC7O00311 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC7O00311 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC7O00311 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDC7O00311 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC7O00311 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC7O00311 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC7O00311 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDC7O00311 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC7O00311 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC7O00311 AC132008.2-207ENST00000454517 770 ntBASIC16.9■□□□□ 0.3
CDC7O00311 AP001269.4-201ENST00000609611 512 ntBASIC16.9■□□□□ 0.3
CDC7O00311 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC7O00311 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC7O00311 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CDC7O00311 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CDC7O00311 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC7O00311 FRMD8P1-201ENST00000440433 1524 ntBASIC16.9■□□□□ 0.3
CDC7O00311 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC7O00311 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDC7O00311 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDC7O00311 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
CDC7O00311 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.89■□□□□ 0.3
CDC7O00311 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDC7O00311 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDC7O00311 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDC7O00311 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CDC7O00311 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC7O00311 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CDC7O00311 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 GPR89P-201ENST00000407924 1495 ntBASIC16.89■□□□□ 0.29
CDC7O00311 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 KRT16P4-201ENST00000453883 522 ntBASIC16.89■□□□□ 0.29
CDC7O00311 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC7O00311 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.89■□□□□ 0.29
CDC7O00311 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.29
CDC7O00311 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC7O00311 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms