Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
AP3B1O00203 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 AC092053.1-201ENST00000605787 1936 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 AC011676.5-201ENST00000624864 2660 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
AP3B1O00203 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
AP3B1O00203 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.41■□□□□ 0.38
AP3B1O00203 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 KRT16P4-201ENST00000453883 522 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 MIR5100-201ENST00000579544 119 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP3B1O00203 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 AC073592.4-201ENST00000623827 446 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 AL358472.4-201ENST00000633140 710 ntBASIC17.41■□□□□ 0.38
AP3B1O00203 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3B1O00203 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3B1O00203 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
AP3B1O00203 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3B1O00203 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3B1O00203 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
AP3B1O00203 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AP3B1O00203 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
AP3B1O00203 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.4■□□□□ 0.38
AP3B1O00203 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.4■□□□□ 0.38
AP3B1O00203 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 AC099336.1-202ENST00000602961 463 ntBASIC17.4■□□□□ 0.38
AP3B1O00203 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.4■□□□□ 0.38
AP3B1O00203 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP3B1O00203 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3B1O00203 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3B1O00203 AC099398.1-201ENST00000567919 2776 ntBASIC17.4■□□□□ 0.38
AP3B1O00203 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3B1O00203 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
AP3B1O00203 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
AP3B1O00203 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3B1O00203 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.39■□□□□ 0.38
AP3B1O00203 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
AP3B1O00203 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3B1O00203 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3B1O00203 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3B1O00203 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
AP3B1O00203 FRMD8P1-201ENST00000440433 1524 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms