Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 FAM197Y1-201ENST00000421178 764 ntBASIC14.98□□□□□ -0.01
HMX3A6NHT5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 AC008040.2-201ENST00000461049 708 ntBASIC14.98□□□□□ -0.01
HMX3A6NHT5 AC098590.1-201ENST00000468126 897 ntBASIC14.98□□□□□ -0.01
HMX3A6NHT5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
HMX3A6NHT5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMX3A6NHT5 REXO1L11P-201ENST00000620964 1927 ntBASIC14.98□□□□□ -0.01
HMX3A6NHT5 LINC02012-201ENST00000608206 1725 ntBASIC14.97□□□□□ -0.01
HMX3A6NHT5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.97□□□□□ -0.01
HMX3A6NHT5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 AC011506.1-201ENST00000474329 610 ntBASIC14.97□□□□□ -0.01
HMX3A6NHT5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 PRSS44-201ENST00000515154 1146 ntBASIC14.97□□□□□ -0.01
HMX3A6NHT5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMX3A6NHT5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HMX3A6NHT5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.96□□□□□ -0.01
HMX3A6NHT5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.96□□□□□ -0.01
HMX3A6NHT5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.96□□□□□ -0.01
HMX3A6NHT5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.96□□□□□ -0.01
HMX3A6NHT5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMX3A6NHT5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.96□□□□□ -0.01
HMX3A6NHT5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms