Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 AC138932.1-201ENST00000534164 6830 ntBASIC18.3■□□□□ 0.52
RCCD1A6NED2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.3■□□□□ 0.52
RCCD1A6NED2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 AL645929.1-201ENST00000420084 975 ntBASIC18.29■□□□□ 0.52
RCCD1A6NED2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 STK19B-204ENST00000512515 211 ntBASIC18.29■□□□□ 0.52
RCCD1A6NED2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 DUX4L17-201ENST00000557360 1267 ntBASIC18.29■□□□□ 0.52
RCCD1A6NED2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.29■□□□□ 0.52
RCCD1A6NED2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCCD1A6NED2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AL513523.2-202ENST00000427283 2040 ntBASIC18.28■□□□□ 0.52
RCCD1A6NED2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 HCG11-201ENST00000411553 5696 ntBASIC18.28■□□□□ 0.52
RCCD1A6NED2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms