Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 CICP6-201ENST00000457191 2729 ntBASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 TP73-AS1-210ENST00000637775 1455 ntBASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 LINC00895-201ENST00000629028 1637 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AP002414.1-201ENST00000391405 1147 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CHCHD2P8-201ENST00000429873 447 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 NTF6B-201ENST00000591913 560 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AL162727.3-201ENST00000635661 2787 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC022188.1-201ENST00000620960 1664 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC092364.2-201ENST00000596710 2692 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 PCDHA1-201ENST00000378133 2726 ntBASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-3A0A0A0MS03 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ALOX12P2-203ENST00000570921 1945 ntBASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms