Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC139426.1-201ENST00000568218 2529 ntBASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 AL592295.1-201ENST00000400984 884 ntBASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHB7Q9Y5E2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB7Q9Y5E2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
PCDHB7Q9Y5E2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB7Q9Y5E2 KRT18P10-201ENST00000388836 1287 ntBASIC26.33■■□□□ 1.81
PCDHB7Q9Y5E2 LINC01003-201ENST00000564834 1764 ntBASIC26.33■■□□□ 1.8
PCDHB7Q9Y5E2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
PCDHB7Q9Y5E2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
PCDHB7Q9Y5E2 THA1P-201ENST00000590384 1145 ntBASIC26.32■■□□□ 1.8
PCDHB7Q9Y5E2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHB7Q9Y5E2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB7Q9Y5E2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB7Q9Y5E2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB7Q9Y5E2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB7Q9Y5E2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB7Q9Y5E2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHB7Q9Y5E2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHB7Q9Y5E2 AC239859.2-201ENST00000444165 318 ntBASIC26.3■■□□□ 1.8
PCDHB7Q9Y5E2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHB7Q9Y5E2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PCDHB7Q9Y5E2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB7Q9Y5E2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
PCDHB7Q9Y5E2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB7Q9Y5E2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB7Q9Y5E2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB7Q9Y5E2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB7Q9Y5E2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PCDHB7Q9Y5E2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB7Q9Y5E2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB7Q9Y5E2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB7Q9Y5E2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB7Q9Y5E2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB7Q9Y5E2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB7Q9Y5E2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB7Q9Y5E2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PCDHB7Q9Y5E2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.24■■□□□ 1.79
PCDHB7Q9Y5E2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB7Q9Y5E2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.24■■□□□ 1.79
PCDHB7Q9Y5E2 Z92544.1-202ENST00000571933 1220 ntBASIC26.24■■□□□ 1.79
PCDHB7Q9Y5E2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB7Q9Y5E2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
PCDHB7Q9Y5E2 AL356441.2-201ENST00000443009 864 ntBASIC26.23■■□□□ 1.79
PCDHB7Q9Y5E2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB7Q9Y5E2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB7Q9Y5E2 AC022616.5-201ENST00000518796 181 ntBASIC26.22■■□□□ 1.79
PCDHB7Q9Y5E2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB7Q9Y5E2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PCDHB7Q9Y5E2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHB7Q9Y5E2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHB7Q9Y5E2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHB7Q9Y5E2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB7Q9Y5E2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB7Q9Y5E2 BX255925.1-201ENST00000566954 1854 ntBASIC26.2■■□□□ 1.78
PCDHB7Q9Y5E2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.2■■□□□ 1.78
PCDHB7Q9Y5E2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
PCDHB7Q9Y5E2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB7Q9Y5E2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB7Q9Y5E2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
PCDHB7Q9Y5E2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHB7Q9Y5E2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms