Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXJ3Q9UPW0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FOXJ3Q9UPW0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
FOXJ3Q9UPW0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXJ3Q9UPW0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXJ3Q9UPW0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXJ3Q9UPW0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXJ3Q9UPW0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXJ3Q9UPW0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXJ3Q9UPW0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21■□□□□ 0.95
FOXJ3Q9UPW0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXJ3Q9UPW0 AL139125.2-201ENST00000623134 1869 ntBASIC21■□□□□ 0.95
FOXJ3Q9UPW0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXJ3Q9UPW0 AC022211.4-201ENST00000625094 2161 ntBASIC21■□□□□ 0.95
FOXJ3Q9UPW0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXJ3Q9UPW0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21■□□□□ 0.95
FOXJ3Q9UPW0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXJ3Q9UPW0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.98■□□□□ 0.95
FOXJ3Q9UPW0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXJ3Q9UPW0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXJ3Q9UPW0 AC138932.3-201ENST00000567634 1902 ntBASIC20.98■□□□□ 0.95
FOXJ3Q9UPW0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXJ3Q9UPW0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXJ3Q9UPW0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 AC096887.2-201ENST00000623443 1957 ntBASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXJ3Q9UPW0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
FOXJ3Q9UPW0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FOXJ3Q9UPW0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
FOXJ3Q9UPW0 AC008813.1-201ENST00000536597 885 ntBASIC20.94■□□□□ 0.94
FOXJ3Q9UPW0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXJ3Q9UPW0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
FOXJ3Q9UPW0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXJ3Q9UPW0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXJ3Q9UPW0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXJ3Q9UPW0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXJ3Q9UPW0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 LINC01971-201ENST00000617888 1048 ntBASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXJ3Q9UPW0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXJ3Q9UPW0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
FOXJ3Q9UPW0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXJ3Q9UPW0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXJ3Q9UPW0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXJ3Q9UPW0 AC148477.6-201ENST00000623746 465 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms