Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 AP004609.3-201ENST00000610705 1884 ntBASIC20.74■□□□□ 0.91
TREM2Q9NZC2 AC091060.1-201ENST00000623524 1766 ntBASIC20.74■□□□□ 0.91
TREM2Q9NZC2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TREM2Q9NZC2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREM2Q9NZC2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 AC133552.2-201ENST00000619106 1032 ntBASIC20.72■□□□□ 0.91
TREM2Q9NZC2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TREM2Q9NZC2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 AC142472.1-201ENST00000612013 1741 ntBASIC20.71■□□□□ 0.91
TREM2Q9NZC2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 RP9P-202ENST00000450133 1212 ntBASIC20.71■□□□□ 0.91
TREM2Q9NZC2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 AC093536.1-201ENST00000569153 554 ntBASIC20.71■□□□□ 0.91
TREM2Q9NZC2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 AC009831.1-201ENST00000580420 1582 ntBASIC20.71■□□□□ 0.91
TREM2Q9NZC2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.71■□□□□ 0.91
TREM2Q9NZC2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
TREM2Q9NZC2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 AC145676.1-201ENST00000514988 2004 ntBASIC20.7■□□□□ 0.9
TREM2Q9NZC2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 MIR3960-201ENST00000583311 91 ntBASIC20.7■□□□□ 0.9
TREM2Q9NZC2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TREM2Q9NZC2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TREM2Q9NZC2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TREM2Q9NZC2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TREM2Q9NZC2 AC004987.1-201ENST00000428627 508 ntBASIC20.69■□□□□ 0.9
TREM2Q9NZC2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.69■□□□□ 0.9
TREM2Q9NZC2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.69■□□□□ 0.9
TREM2Q9NZC2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TREM2Q9NZC2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 TSPY13P-201ENST00000338964 914 ntBASIC20.68■□□□□ 0.9
TREM2Q9NZC2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 ATP5G2P3-201ENST00000429083 425 ntBASIC20.68■□□□□ 0.9
TREM2Q9NZC2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 AC026202.3-201ENST00000600805 1127 ntBASIC20.68■□□□□ 0.9
TREM2Q9NZC2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.68■□□□□ 0.9
TREM2Q9NZC2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.68■□□□□ 0.9
TREM2Q9NZC2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 AL592293.1-201ENST00000502889 1188 ntBASIC20.67■□□□□ 0.9
TREM2Q9NZC2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.67■□□□□ 0.9
TREM2Q9NZC2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TREM2Q9NZC2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TREM2Q9NZC2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TREM2Q9NZC2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TREM2Q9NZC2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TREM2Q9NZC2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms