Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.19■■■□□ 2.1
ZFYVE28Q9HCC9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
ZFYVE28Q9HCC9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZFYVE28Q9HCC9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 TSPY9P-201ENST00000440215 945 ntBASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 TSPY11P-201ENST00000442607 1045 ntBASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.17■■■□□ 2.1
ZFYVE28Q9HCC9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.16■■■□□ 2.1
ZFYVE28Q9HCC9 KRT18P10-201ENST00000388836 1287 ntBASIC28.16■■■□□ 2.1
ZFYVE28Q9HCC9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ZFYVE28Q9HCC9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.16■■■□□ 2.1
ZFYVE28Q9HCC9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.16■■■□□ 2.1
ZFYVE28Q9HCC9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ZFYVE28Q9HCC9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.15■■■□□ 2.1
ZFYVE28Q9HCC9 AC137630.3-201ENST00000607245 391 ntBASIC28.15■■■□□ 2.1
ZFYVE28Q9HCC9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZFYVE28Q9HCC9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZFYVE28Q9HCC9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZFYVE28Q9HCC9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.14■■■□□ 2.1
ZFYVE28Q9HCC9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.14■■■□□ 2.1
ZFYVE28Q9HCC9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZFYVE28Q9HCC9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ZFYVE28Q9HCC9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZFYVE28Q9HCC9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.13■■■□□ 2.09
ZFYVE28Q9HCC9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZFYVE28Q9HCC9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.13■■■□□ 2.09
ZFYVE28Q9HCC9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
ZFYVE28Q9HCC9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZFYVE28Q9HCC9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.12■■■□□ 2.09
ZFYVE28Q9HCC9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.12■■■□□ 2.09
ZFYVE28Q9HCC9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.12■■■□□ 2.09
ZFYVE28Q9HCC9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.12■■■□□ 2.09
ZFYVE28Q9HCC9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.12■■■□□ 2.09
ZFYVE28Q9HCC9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.12■■■□□ 2.09
ZFYVE28Q9HCC9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ZFYVE28Q9HCC9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.11■■■□□ 2.09
ZFYVE28Q9HCC9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ZFYVE28Q9HCC9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZFYVE28Q9HCC9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZFYVE28Q9HCC9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.1■■■□□ 2.09
ZFYVE28Q9HCC9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.1■■■□□ 2.09
ZFYVE28Q9HCC9 AC021242.3-201ENST00000607598 1377 ntBASIC28.1■■■□□ 2.09
ZFYVE28Q9HCC9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ZFYVE28Q9HCC9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ZFYVE28Q9HCC9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 AC131281.2-201ENST00000520478 145 ntBASIC28.08■■■□□ 2.09
ZFYVE28Q9HCC9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.07■■■□□ 2.08
ZFYVE28Q9HCC9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZFYVE28Q9HCC9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.07■■■□□ 2.08
ZFYVE28Q9HCC9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.07■■■□□ 2.08
ZFYVE28Q9HCC9 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.07■■■□□ 2.08
ZFYVE28Q9HCC9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZFYVE28Q9HCC9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.06■■■□□ 2.08
ZFYVE28Q9HCC9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.06■■■□□ 2.08
ZFYVE28Q9HCC9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.06■■■□□ 2.08
ZFYVE28Q9HCC9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.05■■■□□ 2.08
ZFYVE28Q9HCC9 AL136116.3-201ENST00000402907 1138 ntBASIC28.04■■■□□ 2.08
ZFYVE28Q9HCC9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.04■■■□□ 2.08
ZFYVE28Q9HCC9 AC092028.1-203ENST00000608262 953 ntBASIC28.04■■■□□ 2.08
ZFYVE28Q9HCC9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.04■■■□□ 2.08
ZFYVE28Q9HCC9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ZFYVE28Q9HCC9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ZFYVE28Q9HCC9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
ZFYVE28Q9HCC9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZFYVE28Q9HCC9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZFYVE28Q9HCC9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.02■■■□□ 2.08
ZFYVE28Q9HCC9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZFYVE28Q9HCC9 AC120024.1-201ENST00000562672 995 ntBASIC28.02■■■□□ 2.08
ZFYVE28Q9HCC9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
ZFYVE28Q9HCC9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28■■■□□ 2.07
ZFYVE28Q9HCC9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28■■■□□ 2.07
ZFYVE28Q9HCC9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
ZFYVE28Q9HCC9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
ZFYVE28Q9HCC9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
ZFYVE28Q9HCC9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.99■■■□□ 2.07
ZFYVE28Q9HCC9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.99■■■□□ 2.07
ZFYVE28Q9HCC9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ZFYVE28Q9HCC9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
ZFYVE28Q9HCC9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
ZFYVE28Q9HCC9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.98■■■□□ 2.07
ZFYVE28Q9HCC9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms