Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 AL157400.5-201ENST00000507624 621 ntBASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
POPDC3Q9HBV1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
POPDC3Q9HBV1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
POPDC3Q9HBV1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
POPDC3Q9HBV1 AC060814.1-201ENST00000554326 538 ntBASIC23.85■■□□□ 1.41
POPDC3Q9HBV1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.85■■□□□ 1.41
POPDC3Q9HBV1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.85■■□□□ 1.41
POPDC3Q9HBV1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POPDC3Q9HBV1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
POPDC3Q9HBV1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.84■■□□□ 1.41
POPDC3Q9HBV1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POPDC3Q9HBV1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 AC025884.2-201ENST00000553429 711 ntBASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
POPDC3Q9HBV1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.83■■□□□ 1.4
POPDC3Q9HBV1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
POPDC3Q9HBV1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.81■■□□□ 1.4
POPDC3Q9HBV1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
POPDC3Q9HBV1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POPDC3Q9HBV1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.8■■□□□ 1.4
POPDC3Q9HBV1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.8■■□□□ 1.4
POPDC3Q9HBV1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.8■■□□□ 1.4
POPDC3Q9HBV1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
POPDC3Q9HBV1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POPDC3Q9HBV1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
POPDC3Q9HBV1 AC092296.2-201ENST00000589470 999 ntBASIC23.78■■□□□ 1.4
POPDC3Q9HBV1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
POPDC3Q9HBV1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
POPDC3Q9HBV1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
POPDC3Q9HBV1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
POPDC3Q9HBV1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
POPDC3Q9HBV1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
POPDC3Q9HBV1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.76■■□□□ 1.39
POPDC3Q9HBV1 MIR3960-201ENST00000583311 91 ntBASIC23.76■■□□□ 1.39
POPDC3Q9HBV1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
POPDC3Q9HBV1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
POPDC3Q9HBV1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.75■■□□□ 1.39
POPDC3Q9HBV1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
POPDC3Q9HBV1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
POPDC3Q9HBV1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
POPDC3Q9HBV1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
POPDC3Q9HBV1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
POPDC3Q9HBV1 AC142381.3-201ENST00000568208 1670 ntBASIC23.73■■□□□ 1.39
POPDC3Q9HBV1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
POPDC3Q9HBV1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.72■■□□□ 1.39
POPDC3Q9HBV1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.72■■□□□ 1.39
POPDC3Q9HBV1 SMPD5-203ENST00000639008 1464 ntBASIC23.72■■□□□ 1.39
POPDC3Q9HBV1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
POPDC3Q9HBV1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms