Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX47Q9H0S4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX47Q9H0S4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX47Q9H0S4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX47Q9H0S4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX47Q9H0S4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX47Q9H0S4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX47Q9H0S4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX47Q9H0S4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX47Q9H0S4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.08■■□□□ 1.61
DDX47Q9H0S4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.6
DDX47Q9H0S4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX47Q9H0S4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX47Q9H0S4 MIR219A2-201ENST00000608502 1504 ntBASIC25.07■■□□□ 1.6
DDX47Q9H0S4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX47Q9H0S4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DDX47Q9H0S4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
DDX47Q9H0S4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX47Q9H0S4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.05■■□□□ 1.6
DDX47Q9H0S4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
DDX47Q9H0S4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.05■■□□□ 1.6
DDX47Q9H0S4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX47Q9H0S4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX47Q9H0S4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX47Q9H0S4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX47Q9H0S4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX47Q9H0S4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 LINC01971-201ENST00000617888 1048 ntBASIC25.02■■□□□ 1.6
DDX47Q9H0S4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX47Q9H0S4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 AL359504.2-201ENST00000605506 1601 ntBASIC25.01■■□□□ 1.59
DDX47Q9H0S4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX47Q9H0S4 DUX4L13-201ENST00000554103 1267 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L15-201ENST00000611059 1267 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L23-201ENST00000615195 1269 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L24-201ENST00000617576 1269 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L22-201ENST00000618238 1269 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L20-201ENST00000619712 1269 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L21-201ENST00000622058 1269 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L10-201ENST00000622460 1267 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 DUX4L25-201ENST00000624915 1269 ntBASIC25■■□□□ 1.59
DDX47Q9H0S4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX47Q9H0S4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 AC008813.1-201ENST00000536597 885 ntBASIC24.99■■□□□ 1.59
DDX47Q9H0S4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX47Q9H0S4 AC148477.6-201ENST00000623746 465 ntBASIC24.99■■□□□ 1.59
DDX47Q9H0S4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 AL359258.2-201ENST00000564063 1566 ntBASIC24.98■■□□□ 1.59
DDX47Q9H0S4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms