Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCGF1Q9BSM1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCGF1Q9BSM1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.13■□□□□ 0.81
PCGF1Q9BSM1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCGF1Q9BSM1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.13■□□□□ 0.81
PCGF1Q9BSM1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCGF1Q9BSM1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.12■□□□□ 0.81
PCGF1Q9BSM1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.12■□□□□ 0.81
PCGF1Q9BSM1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.12■□□□□ 0.81
PCGF1Q9BSM1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCGF1Q9BSM1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.12■□□□□ 0.81
PCGF1Q9BSM1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCGF1Q9BSM1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCGF1Q9BSM1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCGF1Q9BSM1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCGF1Q9BSM1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.11■□□□□ 0.81
PCGF1Q9BSM1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCGF1Q9BSM1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 TSPY13P-201ENST00000338964 914 ntBASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 AC004987.1-201ENST00000428627 508 ntBASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCGF1Q9BSM1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCGF1Q9BSM1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.09■□□□□ 0.81
PCGF1Q9BSM1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.09■□□□□ 0.81
PCGF1Q9BSM1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCGF1Q9BSM1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCGF1Q9BSM1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCGF1Q9BSM1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCGF1Q9BSM1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCGF1Q9BSM1 AC129492.7-201ENST00000622992 756 ntBASIC20.08■□□□□ 0.81
PCGF1Q9BSM1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCGF1Q9BSM1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCGF1Q9BSM1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCGF1Q9BSM1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCGF1Q9BSM1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCGF1Q9BSM1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCGF1Q9BSM1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCGF1Q9BSM1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 DUX4L18-201ENST00000553347 1267 ntBASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 RAP2CP1-202ENST00000605179 643 ntBASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCGF1Q9BSM1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCGF1Q9BSM1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCGF1Q9BSM1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.05■□□□□ 0.8
PCGF1Q9BSM1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCGF1Q9BSM1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCGF1Q9BSM1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCGF1Q9BSM1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.02■□□□□ 0.8
PCGF1Q9BSM1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCGF1Q9BSM1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCGF1Q9BSM1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.02■□□□□ 0.8
PCGF1Q9BSM1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCGF1Q9BSM1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 AP004609.3-201ENST00000610705 1884 ntBASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 DUX4L9-201ENST00000449051 1259 ntBASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 AC142472.1-201ENST00000612013 1741 ntBASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCGF1Q9BSM1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCGF1Q9BSM1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCGF1Q9BSM1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCGF1Q9BSM1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms