Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.31■■□□□ 1
RNF170Q96K19 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF170Q96K19 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF170Q96K19 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF170Q96K19 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF170Q96K19 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF170Q96K19 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.3■■□□□ 1
RNF170Q96K19 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.3■■□□□ 1
RNF170Q96K19 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF170Q96K19 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF170Q96K19 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.29■■□□□ 1
RNF170Q96K19 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.29■■□□□ 1
RNF170Q96K19 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.29■■□□□ 1
RNF170Q96K19 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF170Q96K19 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF170Q96K19 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF170Q96K19 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF170Q96K19 AC008813.1-201ENST00000536597 885 ntBASIC21.28■■□□□ 1
RNF170Q96K19 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF170Q96K19 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF170Q96K19 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF170Q96K19 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF170Q96K19 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.27■■□□□ 1
RNF170Q96K19 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF170Q96K19 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF170Q96K19 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF170Q96K19 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RNF170Q96K19 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF170Q96K19 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF170Q96K19 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF170Q96K19 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF170Q96K19 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF170Q96K19 AC068473.5-201ENST00000616428 2072 ntBASIC21.26■□□□□ 0.99
RNF170Q96K19 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF170Q96K19 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
RNF170Q96K19 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF170Q96K19 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF170Q96K19 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF170Q96K19 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF170Q96K19 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF170Q96K19 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF170Q96K19 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF170Q96K19 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF170Q96K19 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF170Q96K19 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF170Q96K19 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF170Q96K19 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RNF170Q96K19 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF170Q96K19 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF170Q96K19 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RNF170Q96K19 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF170Q96K19 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF170Q96K19 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF170Q96K19 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF170Q96K19 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF170Q96K19 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF170Q96K19 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF170Q96K19 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
RNF170Q96K19 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF170Q96K19 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF170Q96K19 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF170Q96K19 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF170Q96K19 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RNF170Q96K19 CR559946.2-201ENST00000623684 991 ntBASIC21.21■□□□□ 0.99
RNF170Q96K19 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF170Q96K19 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF170Q96K19 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF170Q96K19 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF170Q96K19 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF170Q96K19 AC092803.2-201ENST00000564287 1899 ntBASIC21.2■□□□□ 0.98
RNF170Q96K19 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF170Q96K19 WHAMMP3-201ENST00000611636 1609 ntBASIC21.2■□□□□ 0.98
RNF170Q96K19 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RNF170Q96K19 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.2■□□□□ 0.98
RNF170Q96K19 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF170Q96K19 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RNF170Q96K19 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF170Q96K19 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF170Q96K19 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF170Q96K19 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF170Q96K19 MIR3648-2-201ENST00000581792 180 ntBASIC21.19■□□□□ 0.98
RNF170Q96K19 MIR3648-1-201ENST00000615959 180 ntBASIC21.19■□□□□ 0.98
RNF170Q96K19 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RNF170Q96K19 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF170Q96K19 MIR7108-201ENST00000614319 87 ntBASIC21.18■□□□□ 0.98
RNF170Q96K19 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 MIR219A2-201ENST00000608502 1504 ntBASIC21.18■□□□□ 0.98
RNF170Q96K19 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF170Q96K19 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF170Q96K19 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF170Q96K19 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF170Q96K19 HLA-V-202ENST00000446817 847 ntBASIC21.17■□□□□ 0.98
RNF170Q96K19 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF170Q96K19 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF170Q96K19 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms