Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TSPY11P-201ENST00000442607 1045 ntBASIC26.85■■□□□ 1.89
TRIM43Q96BQ3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM43Q96BQ3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
TRIM43Q96BQ3 AC022616.5-201ENST00000518796 181 ntBASIC26.83■■□□□ 1.89
TRIM43Q96BQ3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.83■■□□□ 1.89
TRIM43Q96BQ3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.83■■□□□ 1.89
TRIM43Q96BQ3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 KRT18P24-201ENST00000344739 1156 ntBASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 AC131281.2-201ENST00000520478 145 ntBASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM43Q96BQ3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 AC137630.3-201ENST00000607245 391 ntBASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM43Q96BQ3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.8■■□□□ 1.88
TRIM43Q96BQ3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.8■■□□□ 1.88
TRIM43Q96BQ3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRIM43Q96BQ3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.8■■□□□ 1.88
TRIM43Q96BQ3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM43Q96BQ3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.79■■□□□ 1.88
TRIM43Q96BQ3 AC021242.3-201ENST00000607598 1377 ntBASIC26.79■■□□□ 1.88
TRIM43Q96BQ3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.79■■□□□ 1.88
TRIM43Q96BQ3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM43Q96BQ3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.78■■□□□ 1.88
TRIM43Q96BQ3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM43Q96BQ3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.78■■□□□ 1.88
TRIM43Q96BQ3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM43Q96BQ3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM43Q96BQ3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM43Q96BQ3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM43Q96BQ3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.77■■□□□ 1.88
TRIM43Q96BQ3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.76■■□□□ 1.88
TRIM43Q96BQ3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.76■■□□□ 1.87
TRIM43Q96BQ3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.76■■□□□ 1.87
TRIM43Q96BQ3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.76■■□□□ 1.87
TRIM43Q96BQ3 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.76■■□□□ 1.87
TRIM43Q96BQ3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
TRIM43Q96BQ3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.75■■□□□ 1.87
TRIM43Q96BQ3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM43Q96BQ3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM43Q96BQ3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
TRIM43Q96BQ3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.74■■□□□ 1.87
TRIM43Q96BQ3 AL136116.3-201ENST00000402907 1138 ntBASIC26.74■■□□□ 1.87
TRIM43Q96BQ3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
TRIM43Q96BQ3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM43Q96BQ3 AC110285.6-201ENST00000617652 491 ntBASIC26.73■■□□□ 1.87
TRIM43Q96BQ3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM43Q96BQ3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
TRIM43Q96BQ3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM43Q96BQ3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
TRIM43Q96BQ3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.72■■□□□ 1.87
TRIM43Q96BQ3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.72■■□□□ 1.87
TRIM43Q96BQ3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.71■■□□□ 1.87
TRIM43Q96BQ3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM43Q96BQ3 AC092028.1-203ENST00000608262 953 ntBASIC26.71■■□□□ 1.87
TRIM43Q96BQ3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.71■■□□□ 1.87
TRIM43Q96BQ3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.7■■□□□ 1.87
TRIM43Q96BQ3 AC120024.1-201ENST00000562672 995 ntBASIC26.7■■□□□ 1.86
TRIM43Q96BQ3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.7■■□□□ 1.86
TRIM43Q96BQ3 AC005837.3-201ENST00000612163 286 ntBASIC26.7■■□□□ 1.86
TRIM43Q96BQ3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.7■■□□□ 1.86
TRIM43Q96BQ3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
TRIM43Q96BQ3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.69■■□□□ 1.86
TRIM43Q96BQ3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRIM43Q96BQ3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.68■■□□□ 1.86
TRIM43Q96BQ3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.67■■□□□ 1.86
TRIM43Q96BQ3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.67■■□□□ 1.86
TRIM43Q96BQ3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.67■■□□□ 1.86
TRIM43Q96BQ3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43Q96BQ3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43Q96BQ3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43Q96BQ3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43Q96BQ3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43Q96BQ3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM43Q96BQ3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43Q96BQ3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
TRIM43Q96BQ3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43Q96BQ3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43Q96BQ3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms