Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS33AQ96AX1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.09■■□□□ 1.29
VPS33AQ96AX1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
VPS33AQ96AX1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS33AQ96AX1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.09■■□□□ 1.29
VPS33AQ96AX1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS33AQ96AX1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
VPS33AQ96AX1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS33AQ96AX1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS33AQ96AX1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS33AQ96AX1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS33AQ96AX1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS33AQ96AX1 RPS2P35-201ENST00000443417 897 ntBASIC23.07■■□□□ 1.28
VPS33AQ96AX1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS33AQ96AX1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS33AQ96AX1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.06■■□□□ 1.28
VPS33AQ96AX1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.06■■□□□ 1.28
VPS33AQ96AX1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS33AQ96AX1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 AC008813.1-201ENST00000536597 885 ntBASIC23.05■■□□□ 1.28
VPS33AQ96AX1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS33AQ96AX1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS33AQ96AX1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 AC148477.6-201ENST00000623746 465 ntBASIC23.03■■□□□ 1.28
VPS33AQ96AX1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS33AQ96AX1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS33AQ96AX1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS33AQ96AX1 AL359258.2-201ENST00000564063 1566 ntBASIC23.02■■□□□ 1.28
VPS33AQ96AX1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.02■■□□□ 1.28
VPS33AQ96AX1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.02■■□□□ 1.28
VPS33AQ96AX1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS33AQ96AX1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS33AQ96AX1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 AL359504.2-201ENST00000605506 1601 ntBASIC23.01■■□□□ 1.27
VPS33AQ96AX1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 AL139125.2-201ENST00000623134 1869 ntBASIC23.01■■□□□ 1.27
VPS33AQ96AX1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VPS33AQ96AX1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33AQ96AX1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33AQ96AX1 DUX4L11-201ENST00000611504 1267 ntBASIC23■■□□□ 1.27
VPS33AQ96AX1 DUX4L12-201ENST00000614593 1267 ntBASIC23■■□□□ 1.27
VPS33AQ96AX1 DUX4L14-201ENST00000621227 1267 ntBASIC23■■□□□ 1.27
VPS33AQ96AX1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23■■□□□ 1.27
VPS33AQ96AX1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23■■□□□ 1.27
VPS33AQ96AX1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33AQ96AX1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33AQ96AX1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33AQ96AX1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS33AQ96AX1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33AQ96AX1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33AQ96AX1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33AQ96AX1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33AQ96AX1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33AQ96AX1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33AQ96AX1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33AQ96AX1 HLA-V-202ENST00000446817 847 ntBASIC22.98■■□□□ 1.27
VPS33AQ96AX1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33AQ96AX1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33AQ96AX1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS33AQ96AX1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS33AQ96AX1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.96■■□□□ 1.27
VPS33AQ96AX1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS33AQ96AX1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS33AQ96AX1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms