Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
TMEM40Q8WWA1 AC009299.2-201ENST00000482477 511 ntBASIC26.65■■□□□ 1.86
TMEM40Q8WWA1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM40Q8WWA1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.65■■□□□ 1.86
TMEM40Q8WWA1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM40Q8WWA1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
TMEM40Q8WWA1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM40Q8WWA1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.64■■□□□ 1.86
TMEM40Q8WWA1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.64■■□□□ 1.86
TMEM40Q8WWA1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.64■■□□□ 1.85
TMEM40Q8WWA1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TMEM40Q8WWA1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 AC142472.1-201ENST00000612013 1741 ntBASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 RPS2P7-201ENST00000447334 885 ntBASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM40Q8WWA1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM40Q8WWA1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM40Q8WWA1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM40Q8WWA1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
TMEM40Q8WWA1 AC103724.3-201ENST00000564481 992 ntBASIC26.62■■□□□ 1.85
TMEM40Q8WWA1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.62■■□□□ 1.85
TMEM40Q8WWA1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM40Q8WWA1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM40Q8WWA1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM40Q8WWA1 AC142086.6-201ENST00000621154 1765 ntBASIC26.61■■□□□ 1.85
TMEM40Q8WWA1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM40Q8WWA1 AC019171.1-201ENST00000601251 1056 ntBASIC26.6■■□□□ 1.85
TMEM40Q8WWA1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.6■■□□□ 1.85
TMEM40Q8WWA1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM40Q8WWA1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM40Q8WWA1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM40Q8WWA1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM40Q8WWA1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.59■■□□□ 1.85
TMEM40Q8WWA1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM40Q8WWA1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM40Q8WWA1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM40Q8WWA1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM40Q8WWA1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM40Q8WWA1 LONRF2P2-201ENST00000439212 571 ntBASIC26.58■■□□□ 1.85
TMEM40Q8WWA1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM40Q8WWA1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM40Q8WWA1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TMEM40Q8WWA1 AP004609.3-201ENST00000610705 1884 ntBASIC26.57■■□□□ 1.84
TMEM40Q8WWA1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.57■■□□□ 1.84
TMEM40Q8WWA1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM40Q8WWA1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM40Q8WWA1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM40Q8WWA1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM40Q8WWA1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM40Q8WWA1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.53■■□□□ 1.84
TMEM40Q8WWA1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM40Q8WWA1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.53■■□□□ 1.84
TMEM40Q8WWA1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM40Q8WWA1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM40Q8WWA1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TMEM40Q8WWA1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.52■■□□□ 1.84
TMEM40Q8WWA1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.52■■□□□ 1.84
TMEM40Q8WWA1 AL031848.2-201ENST00000607670 837 ntBASIC26.52■■□□□ 1.84
TMEM40Q8WWA1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM40Q8WWA1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM40Q8WWA1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM40Q8WWA1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM40Q8WWA1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.51■■□□□ 1.83
TMEM40Q8WWA1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
TMEM40Q8WWA1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
TMEM40Q8WWA1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM40Q8WWA1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM40Q8WWA1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM40Q8WWA1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM40Q8WWA1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TMEM40Q8WWA1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms