Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 AC093536.1-201ENST00000569153 554 ntBASIC7.38□□□□□ -1.23
SYNE1Q8NF91 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE1Q8NF91 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 PVT1_1.1-201ENST00000615125 194 ntBASIC7.37□□□□□ -1.23
SYNE1Q8NF91 AL356441.2-201ENST00000443009 864 ntBASIC7.37□□□□□ -1.23
SYNE1Q8NF91 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 AC239859.2-201ENST00000444165 318 ntBASIC7.37□□□□□ -1.23
SYNE1Q8NF91 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SYNE1Q8NF91 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 PRTG-204ENST00000561292 833 ntTSL 3 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE1Q8NF91 AL359504.2-201ENST00000605506 1601 ntBASIC7.36□□□□□ -1.23
SYNE1Q8NF91 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 HYI-210ENST00000486909 905 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE1Q8NF91 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 AC131212.1-201ENST00000613771 668 ntBASIC7.34□□□□□ -1.23
SYNE1Q8NF91 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SYNE1Q8NF91 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms