Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC4A11Q8NBS3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.78■■□□□ 1.72
SLC4A11Q8NBS3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.78■■□□□ 1.72
SLC4A11Q8NBS3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLC4A11Q8NBS3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC4A11Q8NBS3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.78■■□□□ 1.72
SLC4A11Q8NBS3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC4A11Q8NBS3 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.76■■□□□ 1.71
SLC4A11Q8NBS3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
SLC4A11Q8NBS3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SLC4A11Q8NBS3 ERN1-208ENST00000606895 2068 ntBASIC25.76■■□□□ 1.71
SLC4A11Q8NBS3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SLC4A11Q8NBS3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SLC4A11Q8NBS3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SLC4A11Q8NBS3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SLC4A11Q8NBS3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SLC4A11Q8NBS3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SLC4A11Q8NBS3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SLC4A11Q8NBS3 AL592293.1-201ENST00000502889 1188 ntBASIC25.74■■□□□ 1.71
SLC4A11Q8NBS3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SLC4A11Q8NBS3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SLC4A11Q8NBS3 NTF6A-201ENST00000591175 560 ntBASIC25.73■■□□□ 1.71
SLC4A11Q8NBS3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.73■■□□□ 1.71
SLC4A11Q8NBS3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.73■■□□□ 1.71
SLC4A11Q8NBS3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.73■■□□□ 1.71
SLC4A11Q8NBS3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC4A11Q8NBS3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SLC4A11Q8NBS3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC4A11Q8NBS3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC4A11Q8NBS3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 KRT18P60-201ENST00000312876 1297 ntBASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
SLC4A11Q8NBS3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.69■■□□□ 1.7
SLC4A11Q8NBS3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC4A11Q8NBS3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SLC4A11Q8NBS3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.69■■□□□ 1.7
SLC4A11Q8NBS3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 DUSP8P4-201ENST00000399538 1761 ntBASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 AC145676.1-201ENST00000514988 2004 ntBASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLC4A11Q8NBS3 AC010501.1-201ENST00000606270 1962 ntBASIC25.67■■□□□ 1.7
SLC4A11Q8NBS3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLC4A11Q8NBS3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLC4A11Q8NBS3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLC4A11Q8NBS3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.67■■□□□ 1.7
SLC4A11Q8NBS3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.66■■□□□ 1.7
SLC4A11Q8NBS3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SLC4A11Q8NBS3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 SPCS2P3-201ENST00000500401 656 ntBASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC4A11Q8NBS3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 AC096887.2-201ENST00000623443 1957 ntBASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC4A11Q8NBS3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC4A11Q8NBS3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SLC4A11Q8NBS3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC4A11Q8NBS3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC4A11Q8NBS3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC4A11Q8NBS3 AC129492.7-201ENST00000622992 756 ntBASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms