Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CRLF3Q8IUI8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CRLF3Q8IUI8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.97■■□□□ 1.43
CRLF3Q8IUI8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CRLF3Q8IUI8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.97■■□□□ 1.43
CRLF3Q8IUI8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CRLF3Q8IUI8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CRLF3Q8IUI8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CRLF3Q8IUI8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CRLF3Q8IUI8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CRLF3Q8IUI8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CRLF3Q8IUI8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CRLF3Q8IUI8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.95■■□□□ 1.43
CRLF3Q8IUI8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CRLF3Q8IUI8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CRLF3Q8IUI8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CRLF3Q8IUI8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CRLF3Q8IUI8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
CRLF3Q8IUI8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CRLF3Q8IUI8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CRLF3Q8IUI8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CRLF3Q8IUI8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CRLF3Q8IUI8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CRLF3Q8IUI8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CRLF3Q8IUI8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CRLF3Q8IUI8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CRLF3Q8IUI8 AC022211.4-201ENST00000625094 2161 ntBASIC23.92■■□□□ 1.42
CRLF3Q8IUI8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CRLF3Q8IUI8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CRLF3Q8IUI8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CRLF3Q8IUI8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.91■■□□□ 1.42
CRLF3Q8IUI8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.9■■□□□ 1.42
CRLF3Q8IUI8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CRLF3Q8IUI8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CRLF3Q8IUI8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CRLF3Q8IUI8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CRLF3Q8IUI8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CRLF3Q8IUI8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CRLF3Q8IUI8 AC138932.3-201ENST00000567634 1902 ntBASIC23.89■■□□□ 1.42
CRLF3Q8IUI8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CRLF3Q8IUI8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.89■■□□□ 1.41
CRLF3Q8IUI8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.89■■□□□ 1.41
CRLF3Q8IUI8 AL139125.2-201ENST00000623134 1869 ntBASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.88■■□□□ 1.41
CRLF3Q8IUI8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.87■■□□□ 1.41
CRLF3Q8IUI8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.87■■□□□ 1.41
CRLF3Q8IUI8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.87■■□□□ 1.41
CRLF3Q8IUI8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.87■■□□□ 1.41
CRLF3Q8IUI8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CRLF3Q8IUI8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CRLF3Q8IUI8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CRLF3Q8IUI8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CRLF3Q8IUI8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.85■■□□□ 1.41
CRLF3Q8IUI8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CRLF3Q8IUI8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.85■■□□□ 1.41
CRLF3Q8IUI8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CRLF3Q8IUI8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CRLF3Q8IUI8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.83■■□□□ 1.41
CRLF3Q8IUI8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.83■■□□□ 1.41
CRLF3Q8IUI8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CRLF3Q8IUI8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CRLF3Q8IUI8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CRLF3Q8IUI8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CRLF3Q8IUI8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CRLF3Q8IUI8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
CRLF3Q8IUI8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRLF3Q8IUI8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRLF3Q8IUI8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CRLF3Q8IUI8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 268.7 ms